Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Gm6722-201ENSMUST00000221586 390 ntBASIC12.99□□□□□ -0.33
Nup88Q8CEC0 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Gm43482-201ENSMUST00000202797 1861 ntBASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup88Q8CEC0 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm6407-201ENSMUST00000176468 549 ntBASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Mir6407-201ENSMUST00000184510 101 ntBASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.98□□□□□ -0.33
Nup88Q8CEC0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm7504-201ENSMUST00000201449 424 ntBASIC12.98□□□□□ -0.33
Nup88Q8CEC0 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup88Q8CEC0 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm14219-201ENSMUST00000120414 288 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm12628-201ENSMUST00000122193 382 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm7741-201ENSMUST00000181445 989 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 AC154184.3-201ENSMUST00000225620 1090 ntBASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
Nup88Q8CEC0 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms