Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Oprl1-205ENSMUST00000108768 2914 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm22711-201ENSMUST00000116890 133 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm14592-201ENSMUST00000117201 560 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm13035-201ENSMUST00000117496 342 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm7851-201ENSMUST00000117574 323 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm13809-201ENSMUST00000117921 597 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm21778-201ENSMUST00000178779 471 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm29067-201ENSMUST00000190821 470 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm45186-201ENSMUST00000206874 478 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Eef2-201ENSMUST00000047864 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Stpg2-201ENSMUST00000062306 2818 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Gm37307-201ENSMUST00000193663 2621 ntBASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.28□□□□□ -0.92
Nhlrc3Q8CCH2 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nhlrc3Q8CCH2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nhlrc3Q8CCH2 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.27□□□□□ -0.92
Nhlrc3Q8CCH2 Gm45165-201ENSMUST00000207763 1631 ntBASIC9.27□□□□□ -0.92
Nhlrc3Q8CCH2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Nhlrc3Q8CCH2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.92
Nhlrc3Q8CCH2 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm14193-201ENSMUST00000105067 153 ntBASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm24990-201ENSMUST00000157406 323 ntBASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm8574-201ENSMUST00000203207 924 ntBASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm19208-201ENSMUST00000213861 912 ntBASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Tm4sf1-201ENSMUST00000029376 1436 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Gm38357-201ENSMUST00000195382 2464 ntBASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Eno2-201ENSMUST00000004378 2795 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Nhlrc3Q8CCH2 Hif1an-201ENSMUST00000040455 6194 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nhlrc3Q8CCH2 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms