Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 AC121870.2-201ENSMUST00000214343 1870 ntBASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rpp38Q80UU2 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Hyal2-206ENSMUST00000195681 2968 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm23061-201ENSMUST00000102348 116 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Mir453-201ENSMUST00000104732 82 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm13888-201ENSMUST00000119148 422 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm11667-201ENSMUST00000119828 486 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm10169-201ENSMUST00000121822 348 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm5244-201ENSMUST00000164001 339 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Mir6407-201ENSMUST00000184510 101 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm43671-201ENSMUST00000200422 433 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm7525-201ENSMUST00000219425 454 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Rpp38Q80UU2 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Gm9673-201ENSMUST00000119287 781 ntBASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Mir1956-201ENSMUST00000157748 65 ntBASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Gm15744-201ENSMUST00000161734 213 ntBASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC10.97□□□□□ -0.65
Rpp38Q80UU2 Gm7880-201ENSMUST00000203748 871 ntBASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms