Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm6158-201ENSMUST00000109467 904 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm14234-201ENSMUST00000119539 845 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm12990-201ENSMUST00000120372 468 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm22146-201ENSMUST00000157397 288 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm5529-201ENSMUST00000165691 891 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm25025-201ENSMUST00000175018 111 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm28877-201ENSMUST00000191349 604 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm19080-201ENSMUST00000196082 550 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm35713-201ENSMUST00000210516 199 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 AC102847.1-202ENSMUST00000226313 1245 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Capsl-202ENSMUST00000226688 739 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 AC154589.2-201ENSMUST00000228847 251 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm26226-201ENSMUST00000082509 116 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm25201-201ENSMUST00000083093 170 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm25517-201ENSMUST00000083865 134 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm42499-201ENSMUST00000196193 1412 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Atp11c-202ENSMUST00000101527 6044 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm11952-201ENSMUST00000121172 821 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm8451-201ENSMUST00000170338 447 ntBASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms