Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm7536-201ENSMUST00000077389 444 ntBASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Gm5453-201ENSMUST00000080866 447 ntBASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh8Q7TSK3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm13549-201ENSMUST00000118339 796 ntBASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm43912-201ENSMUST00000204352 538 ntBASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh8Q7TSK3 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Gm9466-201ENSMUST00000218144 2246 ntBASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Snord55-201ENSMUST00000174939 79 ntBASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC10.87□□□□□ -0.67
Pcdh8Q7TSK3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms