Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm4943-201ENSMUST00000132879 424 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Gm45675-201ENSMUST00000211202 3429 ntBASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Chd4Q6PDQ2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Sppl2c-201ENSMUST00000059448 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Gm4960-201ENSMUST00000182928 1001 ntBASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Gm6426-201ENSMUST00000209048 854 ntBASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Gpr19-201ENSMUST00000046255 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Gm44975-201ENSMUST00000207435 1390 ntBASIC14.1□□□□□ -0.15
Chd4Q6PDQ2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm12377-201ENSMUST00000118656 252 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm37301-201ENSMUST00000195412 568 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm34248-201ENSMUST00000200027 474 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm2716-201ENSMUST00000212350 643 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm29689-201ENSMUST00000221076 589 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 CT025689.5-201ENSMUST00000224316 986 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm36940-201ENSMUST00000194281 2036 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 AC124561.1-202ENSMUST00000228652 1929 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Txk-203ENSMUST00000197313 2190 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Dytn-201ENSMUST00000090313 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Ighv1-5-201ENSMUST00000103494 294 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm14370-201ENSMUST00000122460 868 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm15273-201ENSMUST00000142302 868 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm7023-201ENSMUST00000147295 868 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm14357-201ENSMUST00000178352 868 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm14361-201ENSMUST00000178547 868 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm14348-201ENSMUST00000179183 868 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm8828-201ENSMUST00000196786 1290 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Gm45527-201ENSMUST00000211052 774 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 AC241616.1-201ENSMUST00000213741 166 ntBASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Chd4Q6PDQ2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Chd4Q6PDQ2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Chd4Q6PDQ2 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd4Q6PDQ2 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd4Q6PDQ2 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd4Q6PDQ2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Chd4Q6PDQ2 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Cst10-202ENSMUST00000109938 729 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Chd4Q6PDQ2 AC127583.1-201ENSMUST00000224351 540 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms