Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim37Q6PCX9 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim37Q6PCX9 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trim37Q6PCX9 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim37Q6PCX9 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trim37Q6PCX9 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim37Q6PCX9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trim37Q6PCX9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trim37Q6PCX9 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trim37Q6PCX9 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.33□□□□□ -0.43
Trim37Q6PCX9 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm13039-201ENSMUST00000118638 794 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm24078-201ENSMUST00000158184 103 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm27956-201ENSMUST00000175604 260 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm7192-201ENSMUST00000210793 1137 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 AC187103.3-201ENSMUST00000225725 646 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 CT025681.1-201ENSMUST00000225453 1855 ntBASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gm20773-202ENSMUST00000193306 1341 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trim37Q6PCX9 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 5330413D20Rik-201ENSMUST00000208649 1416 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm23612-201ENSMUST00000103823 110 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm8459-201ENSMUST00000162504 760 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm23576-201ENSMUST00000179918 110 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm28937-201ENSMUST00000185413 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm29400-201ENSMUST00000187208 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm28662-201ENSMUST00000188446 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm28251-201ENSMUST00000188835 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm37318-201ENSMUST00000194325 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm38017-201ENSMUST00000194768 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm37287-201ENSMUST00000195449 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm37793-201ENSMUST00000195548 695 ntBASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC12.32□□□□□ -0.44
Trim37Q6PCX9 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms