Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Btbd7-206ENSMUST00000223554 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Gm12799-201ENSMUST00000118151 2560 ntBASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smarcd3Q6P9Z1 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Plekha7-201ENSMUST00000084664 4312 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm12218-201ENSMUST00000117666 399 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm11941-201ENSMUST00000119904 610 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm14277-201ENSMUST00000121195 360 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm9089-201ENSMUST00000122027 526 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Mir1896-201ENSMUST00000122641 81 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm16570-201ENSMUST00000161951 436 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm19246-201ENSMUST00000173599 255 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37284-201ENSMUST00000193607 539 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Shank2-205ENSMUST00000146006 7666 ntTSL 2 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smarcd3Q6P9Z1 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm9244-201ENSMUST00000056767 2129 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Commd1-204ENSMUST00000159081 4508 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm22920-201ENSMUST00000102175 109 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Gm22711-201ENSMUST00000116890 133 ntBASIC10.06□□□□□ -0.8
Smarcd3Q6P9Z1 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms