Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Gli3Q61602 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gli3Q61602 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gli3Q61602 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Mettl18-201ENSMUST00000045694 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC14.44□□□□□ -0.1
Gli3Q61602 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Sectm1a-202ENSMUST00000100126 680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Rpl7a-ps13-201ENSMUST00000121692 563 ntBASIC14.44□□□□□ -0.1
Gli3Q61602 Gm12551-201ENSMUST00000122073 726 ntBASIC14.44□□□□□ -0.1
Gli3Q61602 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Gm26930-201ENSMUST00000194874 1244 ntBASIC14.44□□□□□ -0.1
Gli3Q61602 Gm42591-201ENSMUST00000197249 700 ntBASIC14.44□□□□□ -0.1
Gli3Q61602 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC14.44□□□□□ -0.1
Gli3Q61602 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC14.44□□□□□ -0.1
Gli3Q61602 Sh2d6-201ENSMUST00000089687 1162 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gli3Q61602 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.44□□□□□ -0.1
Gli3Q61602 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Srsf5-203ENSMUST00000110352 1491 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Srsf5-204ENSMUST00000110354 1489 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gli3Q61602 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC14.44□□□□□ -0.1
Gli3Q61602 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gli3Q61602 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm13542-201ENSMUST00000118484 637 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm28676-201ENSMUST00000188990 591 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm7424-201ENSMUST00000206919 902 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm19045-201ENSMUST00000222488 1193 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 AC124173.1-201ENSMUST00000223701 189 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 1810009J06Rik-201ENSMUST00000076638 882 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Proca1-202ENSMUST00000078099 1254 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm26397-201ENSMUST00000083703 134 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Gli3Q61602 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm3532-201ENSMUST00000181880 1396 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 Myc-208ENSMUST00000191178 1362 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC14.43□□□□□ -0.1
Gli3Q61602 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Fuom-202ENSMUST00000120034 680 ntTSL 3 BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm13861-201ENSMUST00000137136 495 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC14.43□□□□□ -0.1
Gli3Q61602 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 Gm8918-201ENSMUST00000190587 1087 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 E330011O21Rik-201ENSMUST00000209468 1107 ntTSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 AC123692.1-201ENSMUST00000227514 730 ntBASIC14.43□□□□□ -0.1
Gli3Q61602 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Cib3-201ENSMUST00000098630 585 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Gli3Q61602 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Gli3Q61602 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Gm14264-201ENSMUST00000147141 1864 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Gli3Q61602 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gli3Q61602 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms