Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm45354-201ENSMUST00000199820 2557 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Tnfaip3Q60769 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm12986-201ENSMUST00000119037 967 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm29155-201ENSMUST00000185910 269 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Ap3s1-202ENSMUST00000224622 978 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm5805-201ENSMUST00000072779 456 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Tnfaip3Q60769 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Marveld2-204ENSMUST00000225754 3111 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Tnfaip3Q60769 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms