Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Xrcc1Q60596 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 AC123738.2-201ENSMUST00000223791 1899 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm11952-201ENSMUST00000121172 821 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm24074-201ENSMUST00000158178 260 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm28324-201ENSMUST00000187913 264 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 n-R5s211-201ENSMUST00000093689 119 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.53□□□□□ -0.72
Xrcc1Q60596 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Xrcc1Q60596 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Xrcc1Q60596 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.52□□□□□ -0.73
Xrcc1Q60596 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm22379-201ENSMUST00000157480 131 ntBASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm16030-201ENSMUST00000159098 603 ntBASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm16165-201ENSMUST00000160140 795 ntBASIC10.52□□□□□ -0.73
Xrcc1Q60596 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm38210-201ENSMUST00000191944 809 ntBASIC10.52□□□□□ -0.73
Xrcc1Q60596 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.52□□□□□ -0.73
Xrcc1Q60596 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms