Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm4917-201ENSMUST00000121452 650 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm4462-201ENSMUST00000166453 492 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Cd9-ps-201ENSMUST00000174687 650 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm33707-201ENSMUST00000195135 569 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 D5Ertd605e-201ENSMUST00000201128 1081 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm43460-201ENSMUST00000202491 1057 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Olfr1015-201ENSMUST00000047870 1016 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ddx49Q4FZF3 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Ddx49Q4FZF3 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Ddx49Q4FZF3 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm7572-201ENSMUST00000182616 766 ntBASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 n-R5s71-201ENSMUST00000093668 119 ntBASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.89□□□□□ -0.35
Ddx49Q4FZF3 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx49Q4FZF3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ddx49Q4FZF3 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms