Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Muc2-202ENSMUST00000167366 711 ntTSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm27675-201ENSMUST00000184527 94 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm7255-201ENSMUST00000187371 908 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm18182-201ENSMUST00000191380 1251 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm44460-201ENSMUST00000196179 129 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 AC160929.1-201ENSMUST00000221247 415 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Myadm-202ENSMUST00000164553 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gm7061-201ENSMUST00000118127 1416 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Col5a2Q3U962 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC12.92□□□□□ -0.34
Col5a2Q3U962 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm5046-201ENSMUST00000100608 611 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm15132-201ENSMUST00000118581 652 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Actb-207ENSMUST00000167721 1242 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm17107-201ENSMUST00000170983 553 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm28179-201ENSMUST00000188365 613 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm5845-201ENSMUST00000195812 796 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm6426-201ENSMUST00000209048 854 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 AC123061.1-201ENSMUST00000228021 999 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm15702-201ENSMUST00000119680 444 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm16210-201ENSMUST00000122161 610 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 H2afy3-201ENSMUST00000151919 1112 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm5766-202ENSMUST00000161633 799 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm19058-201ENSMUST00000192135 598 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col5a2Q3U962 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.91□□□□□ -0.34
Col5a2Q3U962 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a2Q3U962 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Col5a2Q3U962 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a2Q3U962 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col5a2Q3U962 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms