Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm13035-201ENSMUST00000117496 342 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm11331-201ENSMUST00000119764 288 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm31941-201ENSMUST00000209689 350 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim43aQ3TL54 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.55
Trim43aQ3TL54 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trim43aQ3TL54 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim43aQ3TL54 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm8731-201ENSMUST00000118088 412 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm22902-201ENSMUST00000158488 302 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm12407-201ENSMUST00000180219 324 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm7741-201ENSMUST00000181445 989 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm29499-201ENSMUST00000189151 486 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm28329-201ENSMUST00000191208 689 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm29171-201ENSMUST00000191397 486 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm9111-201ENSMUST00000219394 709 ntBASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trim43aQ3TL54 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Slc16a7-202ENSMUST00000105257 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trim43aQ3TL54 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms