Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm9507-202ENSMUST00000180157 654 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm28671-201ENSMUST00000187036 692 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm43097-201ENSMUST00000196867 151 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm6794-201ENSMUST00000203829 457 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm44939-201ENSMUST00000206939 814 ntTSL 3 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm2448-201ENSMUST00000207080 559 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm40879-201ENSMUST00000220759 612 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm26782-203ENSMUST00000227103 751 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm5449-201ENSMUST00000081132 357 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 March10-201ENSMUST00000049995 3074 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Col9a2Q07643 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Col9a2Q07643 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.91□□□□□ -0.5
Col9a2Q07643 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm5434-202ENSMUST00000222384 1451 ntBASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm5434-201ENSMUST00000071825 1451 ntBASIC11.9□□□□□ -0.5
Col9a2Q07643 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.9□□□□□ -0.5
Col9a2Q07643 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm18539-201ENSMUST00000204745 1090 ntBASIC11.9□□□□□ -0.5
Col9a2Q07643 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.9□□□□□ -0.5
Col9a2Q07643 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Dpt-201ENSMUST00000027861 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.9□□□□□ -0.5
Col9a2Q07643 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC11.9□□□□□ -0.5
Col9a2Q07643 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC11.9□□□□□ -0.5
Col9a2Q07643 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Col9a2Q07643 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col9a2Q07643 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Col9a2Q07643 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Col9a2Q07643 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Col9a2Q07643 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms