Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lig3P97386 Gm25053-201ENSMUST00000103982 133 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm25922-201ENSMUST00000104281 130 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lig3P97386 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.1□□□□□ -0.47
Lig3P97386 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Gm12274-201ENSMUST00000120062 385 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm12712-201ENSMUST00000120676 801 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm9089-201ENSMUST00000122027 526 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC12.1□□□□□ -0.47
Lig3P97386 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Gm24679-201ENSMUST00000158762 111 ntBASIC12.1□□□□□ -0.47
Lig3P97386 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Gm17070-201ENSMUST00000170463 784 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm5706-201ENSMUST00000181525 993 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm7719-201ENSMUST00000182374 975 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.1□□□□□ -0.47
Lig3P97386 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm25053-202ENSMUST00000199731 132 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm6423-201ENSMUST00000204315 934 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm18561-201ENSMUST00000206027 804 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Gm6855-201ENSMUST00000206307 790 ntBASIC12.1□□□□□ -0.47
Lig3P97386 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.1□□□□□ -0.47
Lig3P97386 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.1□□□□□ -0.47
Lig3P97386 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.1□□□□□ -0.47
Lig3P97386 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Lig3P97386 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lig3P97386 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Lig3P97386 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Lig3P97386 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Lig3P97386 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC12.09□□□□□ -0.47
Lig3P97386 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lig3P97386 Rgr-203ENSMUST00000225070 4704 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Rims2-204ENSMUST00000226410 3685 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC12.09□□□□□ -0.47
Lig3P97386 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Gm22594-201ENSMUST00000104251 130 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.09□□□□□ -0.47
Lig3P97386 Gm14993-201ENSMUST00000121180 164 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC12.09□□□□□ -0.47
Lig3P97386 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Gm18801-201ENSMUST00000186616 536 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Gm38151-201ENSMUST00000195085 289 ntBASIC12.09□□□□□ -0.47
Lig3P97386 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC12.09□□□□□ -0.47
Lig3P97386 Gm8574-201ENSMUST00000203207 924 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Lig3P97386 Olfr692-202ENSMUST00000217827 1126 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lig3P97386 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Lig3P97386 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.09□□□□□ -0.47
Lig3P97386 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Lig3P97386 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.09□□□□□ -0.47
Lig3P97386 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Lig3P97386 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Lig3P97386 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Lig3P97386 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC12.08□□□□□ -0.48
Lig3P97386 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms