Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.92□□□□□ -0.5
CiitaP79621 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CiitaP79621 Gm7536-201ENSMUST00000077389 444 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Gm25125-201ENSMUST00000083340 136 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.92□□□□□ -0.5
CiitaP79621 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
CiitaP79621 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
CiitaP79621 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.92□□□□□ -0.5
CiitaP79621 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CiitaP79621 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.91□□□□□ -0.5
CiitaP79621 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Gm44740-201ENSMUST00000205603 1614 ntBASIC11.91□□□□□ -0.5
CiitaP79621 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Gm17214-201ENSMUST00000164501 541 ntBASIC11.91□□□□□ -0.5
CiitaP79621 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Gm26119-201ENSMUST00000175601 104 ntBASIC11.91□□□□□ -0.5
CiitaP79621 Gm7255-201ENSMUST00000187371 908 ntBASIC11.91□□□□□ -0.5
CiitaP79621 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC11.91□□□□□ -0.5
CiitaP79621 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Gm45258-201ENSMUST00000210042 853 ntBASIC11.91□□□□□ -0.5
CiitaP79621 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.91□□□□□ -0.5
CiitaP79621 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 AC124732.3-201ENSMUST00000221835 1765 ntBASIC11.91□□□□□ -0.5
CiitaP79621 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Gm14005-210ENSMUST00000225087 1413 ntBASIC11.91□□□□□ -0.5
CiitaP79621 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
CiitaP79621 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
CiitaP79621 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
CiitaP79621 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
CiitaP79621 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.9□□□□□ -0.5
CiitaP79621 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
CiitaP79621 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Gm15003-201ENSMUST00000118884 446 ntBASIC11.9□□□□□ -0.5
CiitaP79621 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.9□□□□□ -0.5
CiitaP79621 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.9□□□□□ -0.5
CiitaP79621 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.9□□□□□ -0.5
CiitaP79621 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.9□□□□□ -0.5
CiitaP79621 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.9□□□□□ -0.5
CiitaP79621 CT010480.2-201ENSMUST00000225424 737 ntBASIC11.9□□□□□ -0.5
CiitaP79621 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms