Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Gm7255-201ENSMUST00000187371 908 ntBASIC9.67□□□□□ -0.86
Lsm6P62313 Gm17826-201ENSMUST00000189720 798 ntBASIC9.67□□□□□ -0.86
Lsm6P62313 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm6P62313 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Gm8197-202ENSMUST00000193422 934 ntBASIC9.67□□□□□ -0.86
Lsm6P62313 Gm37299-201ENSMUST00000193951 826 ntBASIC9.67□□□□□ -0.86
Lsm6P62313 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC9.67□□□□□ -0.86
Lsm6P62313 AC122035.1-201ENSMUST00000227576 1016 ntBASIC9.67□□□□□ -0.86
Lsm6P62313 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.67□□□□□ -0.86
Lsm6P62313 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Lsm6P62313 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Gm10263-201ENSMUST00000085163 300 ntBASIC9.67□□□□□ -0.86
Lsm6P62313 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Satb1-207ENSMUST00000140979 3748 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Lsm6P62313 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.67□□□□□ -0.86
Lsm6P62313 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Lsm6P62313 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Lsm6P62313 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Lsm6P62313 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.66□□□□□ -0.86
Lsm6P62313 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lsm6P62313 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm11246-201ENSMUST00000120880 345 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
Lsm6P62313 Snord55-201ENSMUST00000174939 79 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC9.66□□□□□ -0.86
Lsm6P62313 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm44100-201ENSMUST00000204329 436 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 Gm18042-201ENSMUST00000219887 790 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
Lsm6P62313 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Gm43289-201ENSMUST00000200537 1475 ntBASIC9.66□□□□□ -0.86
Lsm6P62313 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Lsm6P62313 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.65□□□□□ -0.86
Lsm6P62313 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Lsm6P62313 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Lsm6P62313 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC9.65□□□□□ -0.86
Lsm6P62313 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC9.65□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms