Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.4□□□□□ -0.74
Nup43P59235 Gm5766-201ENSMUST00000160520 1977 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Gm14270-201ENSMUST00000118388 846 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Gm3828-201ENSMUST00000121817 257 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC10.4□□□□□ -0.74
Nup43P59235 Gm12208-201ENSMUST00000122004 163 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC10.4□□□□□ -0.74
Nup43P59235 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.4□□□□□ -0.74
Nup43P59235 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nup43P59235 Gm9358-201ENSMUST00000183067 927 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Platr10-202ENSMUST00000191479 818 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Gm34023-201ENSMUST00000195539 217 ntBASIC10.4□□□□□ -0.74
Nup43P59235 AC166341.2-201ENSMUST00000220571 120 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC10.4□□□□□ -0.74
Nup43P59235 Gm42815-201ENSMUST00000198787 1470 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nup43P59235 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.4□□□□□ -0.74
Nup43P59235 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nup43P59235 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.4□□□□□ -0.74
Nup43P59235 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
Nup43P59235 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.4□□□□□ -0.75
Nup43P59235 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Nup43P59235 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Nup43P59235 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Mir453-201ENSMUST00000104732 82 ntBASIC10.39□□□□□ -0.75
Nup43P59235 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nup43P59235 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.39□□□□□ -0.75
Nup43P59235 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC10.39□□□□□ -0.75
Nup43P59235 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.39□□□□□ -0.75
Nup43P59235 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Mir6998-201ENSMUST00000183343 64 ntBASIC10.39□□□□□ -0.75
Nup43P59235 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Gm45592-201ENSMUST00000209605 1043 ntBASIC10.39□□□□□ -0.75
Nup43P59235 Gm9102-201ENSMUST00000219250 465 ntBASIC10.39□□□□□ -0.75
Nup43P59235 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.39□□□□□ -0.75
Nup43P59235 AC106830.1-201ENSMUST00000228032 1003 ntBASIC10.39□□□□□ -0.75
Nup43P59235 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nup43P59235 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nup43P59235 Gm25125-201ENSMUST00000083340 136 ntBASIC10.39□□□□□ -0.75
Nup43P59235 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Nup43P59235 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.39□□□□□ -0.75
Nup43P59235 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.39□□□□□ -0.75
Nup43P59235 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Nup43P59235 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.38□□□□□ -0.75
Nup43P59235 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.38□□□□□ -0.75
Nup43P59235 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms