Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Gm7551-201ENSMUST00000089593 1074 ntBASIC12.38□□□□□ -0.43
Rrp1P56183 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC12.38□□□□□ -0.43
Rrp1P56183 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Rrp1P56183 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rrp1P56183 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rrp1P56183 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Unc45a-202ENSMUST00000107368 3635 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
Rrp1P56183 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Gm15615-201ENSMUST00000118876 198 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Gm14395-201ENSMUST00000120494 563 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Gm4917-201ENSMUST00000121452 650 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.37□□□□□ -0.43
Rrp1P56183 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Gm43378-201ENSMUST00000199336 582 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Gm43852-201ENSMUST00000202098 917 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 CT030170.2-201ENSMUST00000223267 126 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Nsd1-205ENSMUST00000224693 852 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Gm10463-202ENSMUST00000195772 2889 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.37□□□□□ -0.43
Rrp1P56183 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Rrp1P56183 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Rrp1P56183 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.36□□□□□ -0.43
Rrp1P56183 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.36□□□□□ -0.43
Rrp1P56183 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC12.36□□□□□ -0.43
Rrp1P56183 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Rrp1P56183 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Gm27177-201ENSMUST00000183339 2946 ntTSL 5 BASIC12.36□□□□□ -0.43
Rrp1P56183 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 CT868720.1-201ENSMUST00000223069 2544 ntBASIC12.36□□□□□ -0.43
Rrp1P56183 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Gfra2-203ENSMUST00000227697 1323 ntBASIC12.36□□□□□ -0.43
Rrp1P56183 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Rrp1P56183 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rrp1P56183 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms