Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.73□□□□□ -0.53
NrlP54846 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC11.73□□□□□ -0.53
NrlP54846 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.73□□□□□ -0.53
NrlP54846 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC11.73□□□□□ -0.53
NrlP54846 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC11.73□□□□□ -0.53
NrlP54846 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Gm26368-201ENSMUST00000157826 118 ntBASIC11.73□□□□□ -0.53
NrlP54846 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC11.73□□□□□ -0.53
NrlP54846 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC11.73□□□□□ -0.53
NrlP54846 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Gm43752-201ENSMUST00000198475 697 ntBASIC11.73□□□□□ -0.53
NrlP54846 Gm9353-201ENSMUST00000200472 604 ntBASIC11.73□□□□□ -0.53
NrlP54846 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.73□□□□□ -0.53
NrlP54846 Gm14005-208ENSMUST00000223654 681 ntBASIC11.73□□□□□ -0.53
NrlP54846 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.73□□□□□ -0.53
NrlP54846 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Olfr372-201ENSMUST00000093434 1016 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
NrlP54846 Gm6478-201ENSMUST00000099450 742 ntBASIC11.73□□□□□ -0.53
NrlP54846 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
NrlP54846 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
NrlP54846 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.72□□□□□ -0.53
NrlP54846 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Gm15519-201ENSMUST00000120088 1566 ntBASIC11.72□□□□□ -0.53
NrlP54846 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.72□□□□□ -0.53
NrlP54846 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.72□□□□□ -0.53
NrlP54846 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.72□□□□□ -0.53
NrlP54846 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.72□□□□□ -0.53
NrlP54846 Gm12129-201ENSMUST00000120104 1147 ntBASIC11.72□□□□□ -0.53
NrlP54846 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC11.72□□□□□ -0.53
NrlP54846 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
NrlP54846 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Gm19918-201ENSMUST00000194858 400 ntBASIC11.72□□□□□ -0.53
NrlP54846 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC11.72□□□□□ -0.53
NrlP54846 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.72□□□□□ -0.53
NrlP54846 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.72□□□□□ -0.53
NrlP54846 Gm26782-203ENSMUST00000227103 751 ntBASIC11.72□□□□□ -0.53
NrlP54846 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.72□□□□□ -0.53
NrlP54846 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.72□□□□□ -0.53
NrlP54846 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.72□□□□□ -0.53
NrlP54846 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.72□□□□□ -0.53
NrlP54846 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
NrlP54846 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
NrlP54846 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
NrlP54846 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.71□□□□□ -0.53
NrlP54846 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms