Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 C130071C03Rik-203ENSMUST00000182788 1368 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 Paupar-201ENSMUST00000194826 3482 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Gm13547-202ENSMUST00000113810 629 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Gm5944-201ENSMUST00000118182 1001 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.3□□□□□ -0.6
Sox1P53783 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC11.3□□□□□ -0.6
Sox1P53783 Gm6665-201ENSMUST00000165131 258 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Mir6930-201ENSMUST00000183859 68 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Gm2021-201ENSMUST00000190623 464 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC11.3□□□□□ -0.6
Sox1P53783 AC166061.1-201ENSMUST00000225163 1138 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox1P53783 Olfr403-201ENSMUST00000076675 942 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox1P53783 Olfr43-201ENSMUST00000078936 1092 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Sox1P53783 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox1P53783 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.3□□□□□ -0.6
Sox1P53783 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Sox1P53783 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Supt20-ps-201ENSMUST00000117999 1560 ntBASIC11.29□□□□□ -0.6
Sox1P53783 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox1P53783 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Ppp1r2-ps4-201ENSMUST00000112182 633 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Gm13758-201ENSMUST00000118699 743 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Sox1P53783 Ccpg1os-201ENSMUST00000124565 711 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox1P53783 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.29□□□□□ -0.6
Sox1P53783 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Olfml3-204ENSMUST00000169286 874 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Tead1-211ENSMUST00000170352 1218 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox1P53783 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.29□□□□□ -0.6
Sox1P53783 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.29□□□□□ -0.6
Sox1P53783 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Gm28923-201ENSMUST00000187755 322 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Ighv1-8-201ENSMUST00000192236 293 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Gm4866-201ENSMUST00000197408 589 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC11.29□□□□□ -0.6
Sox1P53783 Rce1-203ENSMUST00000224707 1255 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox1P53783 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Sox1P53783 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox1P53783 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.29□□□□□ -0.6
Sox1P53783 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox1P53783 Gm16214-201ENSMUST00000143710 1388 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sox1P53783 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox1P53783 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms