Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Shmt1P50431 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.62□□□□□ -0.55
Shmt1P50431 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Shmt1P50431 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Shmt1P50431 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.62□□□□□ -0.55
Shmt1P50431 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shmt1P50431 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shmt1P50431 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Shmt1P50431 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Shmt1P50431 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shmt1P50431 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm13019-201ENSMUST00000120000 276 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.61□□□□□ -0.55
Shmt1P50431 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm17221-201ENSMUST00000163909 481 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Gm5529-201ENSMUST00000165691 891 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Gm17073-201ENSMUST00000168069 556 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Gm24809-201ENSMUST00000175318 271 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm6677-201ENSMUST00000195100 441 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm33080-201ENSMUST00000205429 172 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.61□□□□□ -0.55
Shmt1P50431 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.61□□□□□ -0.55
Shmt1P50431 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Shmt1P50431 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shmt1P50431 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Shmt1P50431 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Shmt1P50431 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Hyal2-206ENSMUST00000195681 2968 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Gm13549-201ENSMUST00000118339 796 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Gm20781-201ENSMUST00000193154 693 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Gm21736-201ENSMUST00000195399 693 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Gm43249-201ENSMUST00000200464 458 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC11.6□□□□□ -0.55
Shmt1P50431 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.6□□□□□ -0.55
Shmt1P50431 AC154572.1-201ENSMUST00000226098 1204 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Gm26670-202ENSMUST00000226862 340 ntBASIC11.6□□□□□ -0.55
Shmt1P50431 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shmt1P50431 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms