Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC9.73□□□□□ -0.85
GdnfP48540 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Gm3329-201ENSMUST00000159873 556 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Gm17040-202ENSMUST00000170597 889 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 Gm16505-201ENSMUST00000179981 232 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm28937-201ENSMUST00000185413 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
GdnfP48540 Gm29400-201ENSMUST00000187208 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm28662-201ENSMUST00000188446 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm28251-201ENSMUST00000188835 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm37318-201ENSMUST00000194325 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm38017-201ENSMUST00000194768 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm37287-201ENSMUST00000195449 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm37793-201ENSMUST00000195548 695 ntBASIC9.73□□□□□ -0.85
GdnfP48540 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 AC113082.1-201ENSMUST00000217324 327 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC9.73□□□□□ -0.85
GdnfP48540 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
GdnfP48540 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.73□□□□□ -0.85
GdnfP48540 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
GdnfP48540 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
GdnfP48540 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
GdnfP48540 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
GdnfP48540 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC9.72□□□□□ -0.85
GdnfP48540 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC9.72□□□□□ -0.85
GdnfP48540 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
GdnfP48540 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
GdnfP48540 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC9.72□□□□□ -0.85
GdnfP48540 Nln-205ENSMUST00000224945 2486 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC9.72□□□□□ -0.85
GdnfP48540 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Gm14579-201ENSMUST00000117068 283 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Gm11573-201ENSMUST00000119956 394 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Gm8566-201ENSMUST00000120174 465 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 H2-Q3-201ENSMUST00000172583 608 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
GdnfP48540 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
GdnfP48540 Mir6927-201ENSMUST00000184494 71 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC9.72□□□□□ -0.85
GdnfP48540 AU022133-201ENSMUST00000200601 873 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Gm6450-201ENSMUST00000200896 574 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Gm2553-201ENSMUST00000215986 605 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC9.72□□□□□ -0.85
GdnfP48540 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.72□□□□□ -0.85
GdnfP48540 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
GdnfP48540 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
GdnfP48540 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
GdnfP48540 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms