Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Gm44103-201ENSMUST00000204364 3662 ntBASIC11.33□□□□□ -0.6
Msh2P43247 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC11.33□□□□□ -0.6
Msh2P43247 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Msh2P43247 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Msh2P43247 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.33□□□□□ -0.6
Msh2P43247 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Msh2P43247 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Msh2P43247 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.32□□□□□ -0.6
Msh2P43247 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Gm12247-201ENSMUST00000117585 670 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Gm11836-201ENSMUST00000121022 441 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Msh2P43247 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Gm25226-201ENSMUST00000158198 123 ntBASIC11.32□□□□□ -0.6
Msh2P43247 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Gm7504-201ENSMUST00000201449 424 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Gm43852-201ENSMUST00000202098 917 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Gm17831-201ENSMUST00000205579 900 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.32□□□□□ -0.6
Msh2P43247 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Gm8959-201ENSMUST00000213150 571 ntBASIC11.32□□□□□ -0.6
Msh2P43247 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Msh2P43247 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Msh2P43247 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Msh2P43247 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Msh2P43247 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Gm19165-201ENSMUST00000204453 1982 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC11.31□□□□□ -0.6
Msh2P43247 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.31□□□□□ -0.6
Msh2P43247 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.31□□□□□ -0.6
Msh2P43247 Gm24074-201ENSMUST00000158178 260 ntBASIC11.31□□□□□ -0.6
Msh2P43247 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.31□□□□□ -0.6
Msh2P43247 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Gm4654-201ENSMUST00000183305 982 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
Msh2P43247 Gm27441-201ENSMUST00000185000 105 ntBASIC11.31□□□□□ -0.6
Msh2P43247 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.31□□□□□ -0.6
Msh2P43247 Gm43186-201ENSMUST00000198130 824 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Gm5302-201ENSMUST00000202130 796 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Gm8574-201ENSMUST00000203207 924 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Gm8342-201ENSMUST00000209839 757 ntBASIC11.31□□□□□ -0.6
Msh2P43247 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Msh2P43247 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.31□□□□□ -0.6
Msh2P43247 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms