Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Cdx2P43241 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Cdx2P43241 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cdx2P43241 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cdx2P43241 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Gm23439-201ENSMUST00000104292 132 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdx2P43241 Gm24140-201ENSMUST00000122773 326 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Gm23582-201ENSMUST00000158530 139 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC10.47□□□□□ -0.73
Cdx2P43241 Gm4462-201ENSMUST00000166453 492 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Gm4705-201ENSMUST00000177415 354 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Cdx2P43241 AC160929.1-201ENSMUST00000221247 415 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 AC121357.1-201ENSMUST00000227365 608 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Gm5278-201ENSMUST00000055957 552 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Cdx2P43241 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cdx2P43241 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC10.47□□□□□ -0.73
Cdx2P43241 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.47□□□□□ -0.73
Cdx2P43241 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.47□□□□□ -0.73
Cdx2P43241 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cdx2P43241 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx2P43241 Pigb-202ENSMUST00000098566 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cdx2P43241 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cdx2P43241 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Cdx2P43241 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx2P43241 Gm14592-201ENSMUST00000117201 560 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 Gm5764-201ENSMUST00000118817 885 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC10.46□□□□□ -0.73
Cdx2P43241 Gm16305-201ENSMUST00000140747 556 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC10.46□□□□□ -0.73
Cdx2P43241 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Cdx2P43241 Gm27444-201ENSMUST00000184157 137 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 Gm44420-201ENSMUST00000203669 490 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC10.46□□□□□ -0.73
Cdx2P43241 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Gm32786-201ENSMUST00000211351 628 ntTSL 3 BASIC10.46□□□□□ -0.73
Cdx2P43241 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.46□□□□□ -0.73
Cdx2P43241 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
Cdx2P43241 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cdx2P43241 2310016G11Rik-201ENSMUST00000094460 992 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cdx2P43241 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx2P43241 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Cdx2P43241 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx2P43241 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
Cdx2P43241 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cdx2P43241 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 102.2 ms