Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm8828-201ENSMUST00000196786 1290 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm43097-201ENSMUST00000196867 151 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm2716-201ENSMUST00000212350 643 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm18042-201ENSMUST00000219887 790 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 AC163646.3-202ENSMUST00000228685 691 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Eddm3b-201ENSMUST00000100645 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.32□□□□□ -0.6
Cxcl12P40224 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Cxcl12P40224 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Cxcl12P40224 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.31□□□□□ -0.6
Cxcl12P40224 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl12P40224 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm13842-202ENSMUST00000156331 865 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm8170-201ENSMUST00000218581 945 ntBASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm8796-201ENSMUST00000219122 936 ntBASIC11.31□□□□□ -0.6
Cxcl12P40224 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC11.31□□□□□ -0.6
Cxcl12P40224 Gm42815-201ENSMUST00000198787 1470 ntBASIC11.31□□□□□ -0.6
Cxcl12P40224 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cxcl12P40224 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.3□□□□□ -0.6
Cxcl12P40224 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 AC154197.1-201ENSMUST00000225136 1382 ntBASIC11.3□□□□□ -0.6
Cxcl12P40224 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.3□□□□□ -0.6
Cxcl12P40224 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cxcl12P40224 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC11.3□□□□□ -0.6
Cxcl12P40224 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC11.3□□□□□ -0.6
Cxcl12P40224 Gm16210-201ENSMUST00000122161 610 ntBASIC11.3□□□□□ -0.6
Cxcl12P40224 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms