Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.73□□□□□ -0.37
Pde6aP27664 Gm45219-201ENSMUST00000205602 465 ntBASIC12.73□□□□□ -0.37
Pde6aP27664 Gm7600-201ENSMUST00000209657 785 ntBASIC12.73□□□□□ -0.37
Pde6aP27664 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6aP27664 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Gm8255-201ENSMUST00000218693 305 ntBASIC12.73□□□□□ -0.37
Pde6aP27664 Gm18514-201ENSMUST00000218980 436 ntBASIC12.73□□□□□ -0.37
Pde6aP27664 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6aP27664 AC164429.1-201ENSMUST00000224210 518 ntBASIC12.73□□□□□ -0.37
Pde6aP27664 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Gm7589-201ENSMUST00000085631 534 ntBASIC12.73□□□□□ -0.37
Pde6aP27664 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6aP27664 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pde6aP27664 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6aP27664 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6aP27664 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pde6aP27664 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.73□□□□□ -0.37
Pde6aP27664 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Tmem181b-ps-201ENSMUST00000167717 1413 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm45041-201ENSMUST00000207366 3108 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 Gdf2-201ENSMUST00000100720 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pde6aP27664 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm11573-201ENSMUST00000119956 394 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm22442-201ENSMUST00000157256 144 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm28833-201ENSMUST00000189671 559 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm37028-201ENSMUST00000194276 107 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.72□□□□□ -0.37
Pde6aP27664 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC12.72□□□□□ -0.37
Pde6aP27664 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Pde6aP27664 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pde6aP27664 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 BC043934-202ENSMUST00000185694 2356 ntBASIC12.72□□□□□ -0.37
Pde6aP27664 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pde6aP27664 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.72□□□□□ -0.37
Pde6aP27664 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pde6aP27664 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.71□□□□□ -0.37
Pde6aP27664 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pde6aP27664 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pde6aP27664 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms