Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Itgb3O54890 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Itgb3O54890 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Itgb3O54890 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Itgb3O54890 Gm12136-201ENSMUST00000120460 1209 ntBASIC11.65□□□□□ -0.54
Itgb3O54890 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.65□□□□□ -0.54
Itgb3O54890 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Itgb3O54890 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
Itgb3O54890 Gm33080-201ENSMUST00000205429 172 ntBASIC11.65□□□□□ -0.54
Itgb3O54890 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC11.65□□□□□ -0.54
Itgb3O54890 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.65□□□□□ -0.54
Itgb3O54890 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Itgb3O54890 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Itgb3O54890 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Itgb3O54890 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.65□□□□□ -0.54
Itgb3O54890 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.65□□□□□ -0.54
Itgb3O54890 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.65□□□□□ -0.54
Itgb3O54890 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Itgb3O54890 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Itgb3O54890 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Itgb3O54890 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC11.65□□□□□ -0.55
Itgb3O54890 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Itgb3O54890 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Itgb3O54890 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.64□□□□□ -0.55
Itgb3O54890 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Gm6754-201ENSMUST00000117124 913 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 Gm13022-201ENSMUST00000121181 285 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.64□□□□□ -0.55
Itgb3O54890 AC164429.1-201ENSMUST00000224210 518 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 AC156501.1-201ENSMUST00000228219 270 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC11.64□□□□□ -0.55
Itgb3O54890 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC11.64□□□□□ -0.55
Itgb3O54890 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Itgb3O54890 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Itgb3O54890 Gm15784-201ENSMUST00000120260 1462 ntBASIC11.63□□□□□ -0.55
Itgb3O54890 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Itgb3O54890 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Itgb3O54890 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Itgb3O54890 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms