Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pcdh1F7BJK1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm9915-201ENSMUST00000066196 1383 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm12266-201ENSMUST00000120311 962 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm23085-201ENSMUST00000157849 293 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm2383-201ENSMUST00000181461 807 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm2260-201ENSMUST00000184965 657 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm29499-201ENSMUST00000189151 486 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm28329-201ENSMUST00000191208 689 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm29171-201ENSMUST00000191397 486 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm31941-201ENSMUST00000209689 350 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 AC093022.1-201ENSMUST00000226949 1072 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Mir433-201ENSMUST00000093564 124 ntBASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Oprm1-230ENSMUST00000154906 2039 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Pcdh1F7BJK1 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.83
Pcdh1F7BJK1 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Pcdh1F7BJK1 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Pcdh1F7BJK1 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.83
Pcdh1F7BJK1 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Pcdh1F7BJK1 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm43339-201ENSMUST00000200032 1606 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm40634-201ENSMUST00000214129 2001 ntTSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 March10-204ENSMUST00000138977 2979 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Gm44103-201ENSMUST00000204364 3662 ntBASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 Sp100-201ENSMUST00000054279 1978 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Pcdh1F7BJK1 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms