Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm6141-201ENSMUST00000117181 695 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm11929-201ENSMUST00000118175 945 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm16418-201ENSMUST00000118577 171 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Il24-201ENSMUST00000121040 1159 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm4996-201ENSMUST00000122042 784 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm28381-201ENSMUST00000188403 193 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 0610033M10Rik-202ENSMUST00000205236 1102 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 8030423J24Rik-201ENSMUST00000022091 869 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm4953-201ENSMUST00000077309 483 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm26440-201ENSMUST00000082591 129 ntBASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Ccdc188F6WEU2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Oosp2-201ENSMUST00000121793 677 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm11608-202ENSMUST00000153049 877 ntTSL 3 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm8488-201ENSMUST00000176112 1280 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm24180-201ENSMUST00000179961 110 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm19090-201ENSMUST00000218187 774 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Gm7190-201ENSMUST00000118669 1452 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Ccdc188F6WEU2 Olfr53-201ENSMUST00000084456 1328 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 AC124561.1-202ENSMUST00000228652 1929 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Stard3nl-205ENSMUST00000197565 1391 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 S100a16-205ENSMUST00000107334 879 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm12950-201ENSMUST00000121683 417 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Eif4a-ps4-201ENSMUST00000122226 1218 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm23999-201ENSMUST00000158057 104 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm19668-201ENSMUST00000178581 747 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm3052-201ENSMUST00000186409 829 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Gm37012-201ENSMUST00000194991 1078 ntBASIC11.09□□□□□ -0.63
Ccdc188F6WEU2 Snrp1c-ps1-201ENSMUST00000205464 474 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms