Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn11aQ9R053 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Gm22876-201ENSMUST00000175450 298 ntBASIC12.88□□□□□ -0.35
Scn11aQ9R053 Gm4705-201ENSMUST00000177415 354 ntBASIC12.88□□□□□ -0.35
Scn11aQ9R053 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Gm5291-201ENSMUST00000201965 899 ntBASIC12.88□□□□□ -0.35
Scn11aQ9R053 AC133517.1-201ENSMUST00000225825 594 ntBASIC12.88□□□□□ -0.35
Scn11aQ9R053 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Scn11aQ9R053 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Ighv1-12-201ENSMUST00000103500 294 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm6517-201ENSMUST00000121056 511 ntBASIC12.87□□□□□ -0.35
Scn11aQ9R053 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm23432-201ENSMUST00000157181 131 ntBASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm9409-201ENSMUST00000197017 316 ntBASIC12.87□□□□□ -0.35
Scn11aQ9R053 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Gm1661-201ENSMUST00000077500 1422 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Scn11aQ9R053 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm13426-201ENSMUST00000117887 795 ntBASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm11915-201ENSMUST00000153669 358 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm17107-201ENSMUST00000170983 553 ntBASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm29157-201ENSMUST00000188753 612 ntBASIC12.86□□□□□ -0.35
Scn11aQ9R053 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm12498-201ENSMUST00000138374 2458 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.86□□□□□ -0.35
Scn11aQ9R053 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm15264-201ENSMUST00000118050 502 ntBASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm27441-201ENSMUST00000185000 105 ntBASIC12.86□□□□□ -0.35
Scn11aQ9R053 BB187690-201ENSMUST00000198619 1176 ntBASIC12.86□□□□□ -0.35
Scn11aQ9R053 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Scn11aQ9R053 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Scn11aQ9R053 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms