Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a2Q9JLR1 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a2Q9JLR1 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a2Q9JLR1 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a2Q9JLR1 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Sec61a2Q9JLR1 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.96□□□□□ -0.82
Sec61a2Q9JLR1 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC9.96□□□□□ -0.82
Sec61a2Q9JLR1 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12616-201ENSMUST00000118594 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12624-201ENSMUST00000177615 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12621-201ENSMUST00000177760 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12615-201ENSMUST00000177970 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12622-201ENSMUST00000177975 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12627-201ENSMUST00000178412 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12625-201ENSMUST00000179122 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12614-201ENSMUST00000179586 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12613-201ENSMUST00000180323 382 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm37284-201ENSMUST00000193607 539 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 AC102569.1-201ENSMUST00000221563 685 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 CT030170.2-201ENSMUST00000223267 126 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 AC154680.1-201ENSMUST00000224376 859 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Olfr584-201ENSMUST00000098210 964 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Wdr78-203ENSMUST00000106868 4045 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Sec61a2Q9JLR1 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Dzip1l-204ENSMUST00000112886 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Ighv5-11-201ENSMUST00000193354 371 ntBASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 AC122273.1-201ENSMUST00000213634 2327 ntBASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Sec61a2Q9JLR1 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms