Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm7082-201ENSMUST00000209880 969 ntBASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Gm10752-201ENSMUST00000218348 729 ntBASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Gm8255-201ENSMUST00000218693 305 ntBASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Gm16380-201ENSMUST00000077997 478 ntBASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Stk31-201ENSMUST00000024171 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Upk3aQ9JKX8 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm23153-201ENSMUST00000175323 313 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm3619-201ENSMUST00000219947 775 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 CT030166.5-201ENSMUST00000222249 420 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 AC129308.3-201ENSMUST00000225652 524 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Gm28624-201ENSMUST00000186430 2131 ntBASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.57□□□□□ -0.72
Upk3aQ9JKX8 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Gm44086-201ENSMUST00000203251 2349 ntBASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Upk3aQ9JKX8 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms