Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm3828-201ENSMUST00000121817 257 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 n-R5s84-201ENSMUST00000122591 109 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm26134-201ENSMUST00000178484 110 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm42816-201ENSMUST00000198433 325 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Rnf6Q9DBU5 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Mir3547-201ENSMUST00000175461 88 ntBASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm38321-201ENSMUST00000195053 235 ntBASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm10699-201ENSMUST00000098916 2130 ntBASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Rnf6Q9DBU5 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Gm42851-201ENSMUST00000201325 1411 ntBASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Rnf6Q9DBU5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms