Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Chmp2aQ9DB34 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Cnppd1-202ENSMUST00000168720 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm14892-201ENSMUST00000117636 267 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm15744-201ENSMUST00000161734 213 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Snord55-201ENSMUST00000174939 79 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm8197-202ENSMUST00000193422 934 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm30946-201ENSMUST00000198288 724 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm6439-201ENSMUST00000199849 862 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm44158-201ENSMUST00000203881 505 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm19009-201ENSMUST00000223072 823 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 AC122035.1-201ENSMUST00000227576 1016 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Chmp2aQ9DB34 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Bcl2-202ENSMUST00000189999 2841 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm12986-201ENSMUST00000119037 967 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm13284-201ENSMUST00000121020 547 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm6407-201ENSMUST00000176468 549 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Mir6998-201ENSMUST00000183343 64 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm9139-201ENSMUST00000218817 700 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gm37859-201ENSMUST00000195529 2173 ntBASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chmp2aQ9DB34 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms