Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Gm37333-201ENSMUST00000192904 2251 ntBASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Gm43152-201ENSMUST00000202495 1638 ntBASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Gm43972-201ENSMUST00000181398 1467 ntBASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Gm45828-201ENSMUST00000206938 1836 ntBASIC13.16□□□□□ -0.3
Chmp4cQ9D7F7 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm9089-201ENSMUST00000122027 526 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm25492-201ENSMUST00000157383 129 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm4654-201ENSMUST00000183305 982 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Uba52-ps-201ENSMUST00000183770 379 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Mrip-ps-201ENSMUST00000184613 940 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm19208-201ENSMUST00000213861 912 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm5822-201ENSMUST00000161562 1378 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm7642-201ENSMUST00000216345 1809 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gm44153-201ENSMUST00000204162 1580 ntBASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Chmp4cQ9D7F7 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC13.15□□□□□ -0.31
Chmp4cQ9D7F7 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC13.15□□□□□ -0.31
Chmp4cQ9D7F7 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 4933439C10Rik-203ENSMUST00000132226 3184 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm37447-201ENSMUST00000195625 2928 ntBASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm24992-201ENSMUST00000157412 130 ntBASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm21778-201ENSMUST00000178779 471 ntBASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Mir8115-201ENSMUST00000184992 119 ntBASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.14□□□□□ -0.31
Chmp4cQ9D7F7 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms