Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm22846-201ENSMUST00000157706 270 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm36991-201ENSMUST00000191800 648 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 AA914427-201ENSMUST00000193194 1166 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm37641-201ENSMUST00000193837 239 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm38151-201ENSMUST00000195085 289 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm38317-201ENSMUST00000195564 343 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm5714-201ENSMUST00000197343 566 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm6082-201ENSMUST00000215204 454 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm6722-201ENSMUST00000221586 390 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trim13Q9CYB0 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm15617-201ENSMUST00000118973 771 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Mir7677-201ENSMUST00000184226 67 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm42867-201ENSMUST00000202995 469 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm17812-201ENSMUST00000204935 318 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm270-201ENSMUST00000223010 976 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Snhg11-201ENSMUST00000109488 5864 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm43999-201ENSMUST00000204286 2889 ntBASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trim13Q9CYB0 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trim13Q9CYB0 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms