Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Rnf135Q9CWS1 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm14592-201ENSMUST00000117201 560 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm15528-201ENSMUST00000117821 864 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm11573-201ENSMUST00000119956 394 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm9645-201ENSMUST00000197131 792 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf135Q9CWS1 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm21358-201ENSMUST00000191645 1659 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm1848-201ENSMUST00000120711 789 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm13182-201ENSMUST00000122241 312 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Mir1901-201ENSMUST00000122616 78 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm24992-201ENSMUST00000157412 130 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm24074-201ENSMUST00000158178 260 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm23045-201ENSMUST00000175041 96 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Mir6998-201ENSMUST00000183343 64 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm37981-201ENSMUST00000194280 535 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm43186-201ENSMUST00000198130 824 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.46□□□□□ -0.57
Rnf135Q9CWS1 Saa-ps-201ENSMUST00000211148 320 ntBASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms