Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm23255-201ENSMUST00000102244 110 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm24279-201ENSMUST00000104236 131 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm8111-201ENSMUST00000117659 987 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm5599-201ENSMUST00000209602 788 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 Capsl-202ENSMUST00000226688 739 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.72□□□□□ -0.85
Scrt1Q99M85 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Scrt1Q99M85 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Scrt1Q99M85 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Gm13039-201ENSMUST00000118638 794 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Gm15196-201ENSMUST00000121406 482 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Gm14165-201ENSMUST00000121456 952 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Gm2594-201ENSMUST00000214774 742 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 AC134248.1-201ENSMUST00000216113 1176 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC9.71□□□□□ -0.86
Scrt1Q99M85 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.71□□□□□ -0.86
Scrt1Q99M85 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms