Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Gm23218-201ENSMUST00000158124 276 ntBASIC14.03□□□□□ -0.16
Usp16Q99LG0 Gm20781-201ENSMUST00000193154 693 ntBASIC14.03□□□□□ -0.16
Usp16Q99LG0 Gm21736-201ENSMUST00000195399 693 ntBASIC14.03□□□□□ -0.16
Usp16Q99LG0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC14.03□□□□□ -0.16
Usp16Q99LG0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Gm7405-201ENSMUST00000121476 1337 ntBASIC14.03□□□□□ -0.16
Usp16Q99LG0 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Usp16Q99LG0 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Usp16Q99LG0 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp16Q99LG0 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC14.02□□□□□ -0.17
Usp16Q99LG0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Gm31274-201ENSMUST00000197356 229 ntBASIC14.02□□□□□ -0.17
Usp16Q99LG0 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC14.02□□□□□ -0.17
Usp16Q99LG0 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.02□□□□□ -0.17
Usp16Q99LG0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Usp16Q99LG0 Gm9035-201ENSMUST00000218318 1697 ntBASIC14.01□□□□□ -0.17
Usp16Q99LG0 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gm45165-201ENSMUST00000207763 1631 ntBASIC14.01□□□□□ -0.17
Usp16Q99LG0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gm6677-201ENSMUST00000195100 441 ntBASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gm40414-201ENSMUST00000197608 481 ntBASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gm43249-201ENSMUST00000200464 458 ntBASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gm18035-201ENSMUST00000211962 589 ntBASIC14.01□□□□□ -0.17
Usp16Q99LG0 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gm25125-201ENSMUST00000083340 136 ntBASIC14.01□□□□□ -0.17
Usp16Q99LG0 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Usp16Q99LG0 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp16Q99LG0 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC14□□□□□ -0.17
Usp16Q99LG0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC14□□□□□ -0.17
Usp16Q99LG0 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp16Q99LG0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp16Q99LG0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC14□□□□□ -0.17
Usp16Q99LG0 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Usp16Q99LG0 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC14□□□□□ -0.17
Usp16Q99LG0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Usp16Q99LG0 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Usp16Q99LG0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC14□□□□□ -0.17
Usp16Q99LG0 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14□□□□□ -0.17
Usp16Q99LG0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms