Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm17391-201ENSMUST00000171036 126 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12624-201ENSMUST00000177615 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12621-201ENSMUST00000177760 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12615-201ENSMUST00000177970 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12622-201ENSMUST00000177975 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12627-201ENSMUST00000178412 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12625-201ENSMUST00000179122 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12614-201ENSMUST00000179586 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm12613-201ENSMUST00000180323 382 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Usp11Q99K46 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Usp11Q99K46 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.62□□□□□ -0.55
Usp11Q99K46 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC11.62□□□□□ -0.55
Usp11Q99K46 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Usp11Q99K46 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 AC207128.2-201ENSMUST00000223708 1924 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm14263-201ENSMUST00000117955 746 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm15615-201ENSMUST00000118876 198 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm15549-201ENSMUST00000121595 622 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm6439-201ENSMUST00000199849 862 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm17825-201ENSMUST00000206836 794 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.61□□□□□ -0.55
Usp11Q99K46 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.61□□□□□ -0.55
Usp11Q99K46 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Crocc2-201ENSMUST00000138595 7132 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Usp11Q99K46 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Usp11Q99K46 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm3294-201ENSMUST00000164104 7367 ntTSL 3 BASIC11.6□□□□□ -0.55
Usp11Q99K46 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.6□□□□□ -0.55
Usp11Q99K46 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Usp11Q99K46 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm4294-201ENSMUST00000105169 614 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm15329-201ENSMUST00000121408 155 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.6□□□□□ -0.55
Usp11Q99K46 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Usp11Q99K46 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm5523-201ENSMUST00000180415 997 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm3786-201ENSMUST00000202659 378 ntBASIC11.6□□□□□ -0.55
Usp11Q99K46 Gm45770-201ENSMUST00000212105 616 ntBASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms