Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm43002-201ENSMUST00000200310 155 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm6722-201ENSMUST00000221586 390 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Pcdhga4Q91XY4 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm12856-201ENSMUST00000119471 1293 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm24398-201ENSMUST00000157870 109 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm26134-201ENSMUST00000178484 110 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm5342-201ENSMUST00000181982 1003 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 CT025553.1-201ENSMUST00000226292 299 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Sipa1l2-202ENSMUST00000212168 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gm3836-201ENSMUST00000211377 1613 ntBASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Pcdhga4Q91XY4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Pcdhga4Q91XY4 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms