Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Vopp1Q8R1C3 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Gm6783-201ENSMUST00000120916 1437 ntBASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Vopp1Q8R1C3 Gm45675-201ENSMUST00000211202 3429 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm22582-201ENSMUST00000102283 94 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm15554-201ENSMUST00000120406 913 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm24140-201ENSMUST00000122773 326 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm7539-201ENSMUST00000189789 630 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm4430-202ENSMUST00000193902 1041 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm38321-201ENSMUST00000195053 235 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm18466-201ENSMUST00000209147 499 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 AC157650.1-201ENSMUST00000224582 610 ntBASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Vopp1Q8R1C3 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm23255-201ENSMUST00000102244 110 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Snora68-201ENSMUST00000104375 131 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm15341-201ENSMUST00000137315 592 ntTSL 3 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Aif1l-207ENSMUST00000148056 670 ntTSL 5 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm4960-201ENSMUST00000182928 1001 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm37141-201ENSMUST00000191938 422 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm38038-201ENSMUST00000193803 259 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm44304-201ENSMUST00000200509 145 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm44420-201ENSMUST00000203669 490 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm7319-201ENSMUST00000210047 778 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm8557-201ENSMUST00000220777 475 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 CT030035.1-201ENSMUST00000223964 935 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 AC129217.1-201ENSMUST00000225181 642 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 AC149294.3-201ENSMUST00000226888 732 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Gm8894-201ENSMUST00000074642 666 ntBASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Vopp1Q8R1C3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms