Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm44126-201ENSMUST00000204831 514 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 AC114645.1-201ENSMUST00000215831 187 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Lgi3-203ENSMUST00000226548 1001 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.39□□□□□ -0.75
Clrn1Q8K445 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Clrn1Q8K445 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm44999-201ENSMUST00000207456 1493 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Rpgrip1-202ENSMUST00000111603 5380 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm13888-201ENSMUST00000119148 422 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm14460-201ENSMUST00000121511 639 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm24398-201ENSMUST00000157870 109 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm22334-201ENSMUST00000158070 133 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm5523-201ENSMUST00000180415 997 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Mir7076-201ENSMUST00000183519 74 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm44329-201ENSMUST00000197469 112 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm5302-201ENSMUST00000202130 796 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 AC122035.1-201ENSMUST00000227576 1016 ntBASIC10.38□□□□□ -0.75
Clrn1Q8K445 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Clrn1Q8K445 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Nup50-201ENSMUST00000165443 4741 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm13284-201ENSMUST00000121020 547 ntBASIC10.37□□□□□ -0.75
Clrn1Q8K445 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Clrn1Q8K445 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms