Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Ccdc28aQ8CEI3 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ccdc28aQ8CEI3 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Ccdc28aQ8CEI3 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm5822-201ENSMUST00000161562 1378 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm14193-201ENSMUST00000105067 153 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm13809-201ENSMUST00000117921 597 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm12266-201ENSMUST00000120311 962 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ccdc28aQ8CEI3 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 AC140462.2-201ENSMUST00000225718 2433 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm15264-201ENSMUST00000118050 502 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm24992-201ENSMUST00000157412 130 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm17040-202ENSMUST00000170597 889 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm7255-201ENSMUST00000187371 908 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm43852-201ENSMUST00000202098 917 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm6905-201ENSMUST00000205729 511 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm2517-201ENSMUST00000215651 348 ntBASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Ccdc28aQ8CEI3 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms