Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Myadm-201ENSMUST00000096744 2814 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Zscan21-202ENSMUST00000080732 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm37307-201ENSMUST00000193663 2621 ntBASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm8566-201ENSMUST00000120174 465 ntBASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm44420-201ENSMUST00000203669 490 ntBASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm31941-201ENSMUST00000209689 350 ntBASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Txk-201ENSMUST00000113604 2260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Zmat2-201ENSMUST00000001419 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Ccdc28bQ8CEG5 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm6015-201ENSMUST00000217493 1586 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Sh2d3c-201ENSMUST00000074248 3092 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Hspd1-ps4-201ENSMUST00000121815 1668 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Ttc16-206ENSMUST00000161430 2874 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm23596-201ENSMUST00000104304 132 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm25148-201ENSMUST00000104611 123 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm12957-201ENSMUST00000117835 377 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm13665-201ENSMUST00000120830 528 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm16505-201ENSMUST00000179981 232 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm38317-201ENSMUST00000195564 343 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Tal2-201ENSMUST00000030124 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gm15983-201ENSMUST00000140000 4814 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Ccdc28bQ8CEG5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Il18bp-202ENSMUST00000209368 2596 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Ppil2-201ENSMUST00000023455 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Ccdc28bQ8CEG5 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms