Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm4909-201ENSMUST00000118749 794 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm12407-201ENSMUST00000180219 324 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm8342-201ENSMUST00000209839 757 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm6722-201ENSMUST00000221586 390 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 CT009713.8-201ENSMUST00000225448 560 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm8320-201ENSMUST00000177584 1762 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm8303-201ENSMUST00000178371 1762 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm8331-201ENSMUST00000178433 1762 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm19327-201ENSMUST00000220651 3271 ntBASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm28635-201ENSMUST00000189772 4734 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Il9r-205ENSMUST00000145401 4482 ntAPPRIS P3 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Gm26737-201ENSMUST00000181106 2151 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.36□□□□□ -0.91
Rnf170Q8CBG9 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm14193-201ENSMUST00000105067 153 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm6397-201ENSMUST00000161973 1069 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm5996-201ENSMUST00000211110 718 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 AC159747.1-201ENSMUST00000219903 265 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm7551-201ENSMUST00000089593 1074 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 AC109214.1-201ENSMUST00000219520 1372 ntBASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
Rnf170Q8CBG9 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Rnf170Q8CBG9 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Rnf170Q8CBG9 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Rnf170Q8CBG9 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms