Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ighv13-1-201ENSMUST00000103480 294 ntBASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Gm13351-201ENSMUST00000118087 414 ntBASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Gm7536-201ENSMUST00000077389 444 ntBASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 BC043934-202ENSMUST00000185694 2356 ntBASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Gm44740-201ENSMUST00000205603 1614 ntBASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Alx1Q8C8B0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm17221-201ENSMUST00000163909 481 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm17073-201ENSMUST00000168069 556 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm26119-201ENSMUST00000175601 104 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 AC125409.1-201ENSMUST00000223213 3370 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.79□□□□□ -0.36
Alx1Q8C8B0 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm16518-201ENSMUST00000117960 508 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm18733-202ENSMUST00000174447 401 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm43249-201ENSMUST00000200464 458 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm6352-201ENSMUST00000203583 1134 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Gm44605-201ENSMUST00000206892 949 ntBASIC12.78□□□□□ -0.36
Alx1Q8C8B0 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Alx1Q8C8B0 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms