Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm24791-201ENSMUST00000104284 131 ntBASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm13600-201ENSMUST00000117949 744 ntBASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm14993-201ENSMUST00000121180 164 ntBASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm17221-201ENSMUST00000163909 481 ntBASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm17073-201ENSMUST00000168069 556 ntBASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pcdh19Q80TF3 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm12663-201ENSMUST00000118481 958 ntBASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 AC155245.1-201ENSMUST00000222266 1804 ntBASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pcdh19Q80TF3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Pcdh19Q80TF3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms